Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.71□□□□□ -0.53
Lsm6P62313 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.71□□□□□ -0.53
Lsm6P62313 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.71□□□□□ -0.53
Lsm6P62313 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Gm44855-201ENSMUST00000205725 362 ntBASIC11.71□□□□□ -0.53
Lsm6P62313 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.71□□□□□ -0.53
Lsm6P62313 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.71□□□□□ -0.53
Lsm6P62313 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm6P62313 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lsm6P62313 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm6P62313 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm6P62313 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.71□□□□□ -0.53
Lsm6P62313 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.71□□□□□ -0.54
Lsm6P62313 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm6P62313 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lsm6P62313 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.7□□□□□ -0.54
Lsm6P62313 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Auts2-212ENSMUST00000178555 309 ntBASIC11.7□□□□□ -0.54
Lsm6P62313 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.7□□□□□ -0.54
Lsm6P62313 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.7□□□□□ -0.54
Lsm6P62313 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.7□□□□□ -0.54
Lsm6P62313 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Syt7-205ENSMUST00000224135 1557 ntBASIC11.7□□□□□ -0.54
Lsm6P62313 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm6P62313 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm6P62313 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm6P62313 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm6P62313 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lsm6P62313 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Mir6977-201ENSMUST00000184960 64 ntBASIC11.69□□□□□ -0.54
Lsm6P62313 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm6P62313 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.69□□□□□ -0.54
Lsm6P62313 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.69□□□□□ -0.54
Lsm6P62313 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm6P62313 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms