Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lsm3P62311 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Lsm3P62311 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.11□□□□□ -0.47
Lsm3P62311 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.11□□□□□ -0.47
Lsm3P62311 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm3P62311 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm3P62311 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm3P62311 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm3P62311 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm3P62311 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lsm3P62311 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lsm3P62311 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.1□□□□□ -0.47
Lsm3P62311 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.1□□□□□ -0.47
Lsm3P62311 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Gm6376-201ENSMUST00000209407 580 ntBASIC12.1□□□□□ -0.47
Lsm3P62311 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Thap2-203ENSMUST00000218989 527 ntBASIC12.1□□□□□ -0.47
Lsm3P62311 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.1□□□□□ -0.47
Lsm3P62311 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.1□□□□□ -0.47
Lsm3P62311 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.1□□□□□ -0.47
Lsm3P62311 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm3P62311 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm3P62311 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.09□□□□□ -0.47
Lsm3P62311 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.09□□□□□ -0.47
Lsm3P62311 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lsm3P62311 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm3P62311 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lsm3P62311 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm3P62311 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Gm7153-201ENSMUST00000117092 455 ntBASIC12.09□□□□□ -0.47
Lsm3P62311 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.09□□□□□ -0.47
Lsm3P62311 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.09□□□□□ -0.47
Lsm3P62311 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.09□□□□□ -0.47
Lsm3P62311 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Gm18027-201ENSMUST00000218947 619 ntBASIC12.09□□□□□ -0.47
Lsm3P62311 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.09□□□□□ -0.47
Lsm3P62311 Gm7461-201ENSMUST00000058918 827 ntBASIC12.09□□□□□ -0.47
Lsm3P62311 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm3P62311 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms