Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nphp4P59240 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.85■□□□□ 0.45
Nphp4P59240 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.85■□□□□ 0.45
Nphp4P59240 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Gm13736-201ENSMUST00000119272 253 ntBASIC17.84■□□□□ 0.45
Nphp4P59240 Gm14726-201ENSMUST00000120623 896 ntBASIC17.84■□□□□ 0.45
Nphp4P59240 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Nphp4P59240 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC17.84■□□□□ 0.45
Nphp4P59240 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC17.84■□□□□ 0.45
Nphp4P59240 Gm18056-201ENSMUST00000207670 568 ntBASIC17.84■□□□□ 0.45
Nphp4P59240 Gm18061-201ENSMUST00000208350 562 ntBASIC17.84■□□□□ 0.45
Nphp4P59240 Gm18063-201ENSMUST00000208529 568 ntBASIC17.84■□□□□ 0.45
Nphp4P59240 Gm18052-201ENSMUST00000208750 559 ntBASIC17.84■□□□□ 0.45
Nphp4P59240 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Nphp4P59240 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nphp4P59240 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.84■□□□□ 0.45
Nphp4P59240 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp4P59240 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nphp4P59240 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.83■□□□□ 0.45
Nphp4P59240 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC17.83■□□□□ 0.45
Nphp4P59240 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC17.83■□□□□ 0.45
Nphp4P59240 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nphp4P59240 Gm2546-201ENSMUST00000182630 991 ntBASIC17.83■□□□□ 0.45
Nphp4P59240 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC17.83■□□□□ 0.45
Nphp4P59240 Gm6652-201ENSMUST00000186414 1070 ntBASIC17.83■□□□□ 0.45
Nphp4P59240 Gm5950-201ENSMUST00000213337 772 ntBASIC17.83■□□□□ 0.45
Nphp4P59240 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nphp4P59240 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp4P59240 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp4P59240 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC17.83■□□□□ 0.44
Nphp4P59240 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.83■□□□□ 0.44
Nphp4P59240 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp4P59240 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp4P59240 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC17.83■□□□□ 0.44
Nphp4P59240 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp4P59240 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp4P59240 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp4P59240 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nphp4P59240 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp4P59240 Gm6992-201ENSMUST00000217973 1607 ntBASIC17.82■□□□□ 0.44
Nphp4P59240 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC17.82■□□□□ 0.44
Nphp4P59240 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.82■□□□□ 0.44
Nphp4P59240 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nphp4P59240 Gm5597-201ENSMUST00000182353 1193 ntBASIC17.82■□□□□ 0.44
Nphp4P59240 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC17.82■□□□□ 0.44
Nphp4P59240 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.82■□□□□ 0.44
Nphp4P59240 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nphp4P59240 Gm6082-201ENSMUST00000215204 454 ntBASIC17.82■□□□□ 0.44
Nphp4P59240 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.82■□□□□ 0.44
Nphp4P59240 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.82■□□□□ 0.44
Nphp4P59240 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Nphp4P59240 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp4P59240 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC17.82■□□□□ 0.44
Nphp4P59240 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp4P59240 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC17.81■□□□□ 0.44
Nphp4P59240 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp4P59240 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.81■□□□□ 0.44
Nphp4P59240 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Nphp4P59240 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms