Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tpm1P58771 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.87□□□□□ -0.03
Tpm1P58771 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tpm1P58771 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tpm1P58771 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Tpm1P58771 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.86□□□□□ -0.03
Tpm1P58771 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tpm1P58771 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.86□□□□□ -0.03
Tpm1P58771 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.86□□□□□ -0.03
Tpm1P58771 Gm15467-201ENSMUST00000120582 445 ntBASIC14.86□□□□□ -0.03
Tpm1P58771 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.86□□□□□ -0.03
Tpm1P58771 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.86□□□□□ -0.03
Tpm1P58771 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.86□□□□□ -0.03
Tpm1P58771 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.86□□□□□ -0.03
Tpm1P58771 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tpm1P58771 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Tpm1P58771 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.85□□□□□ -0.03
Tpm1P58771 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Gm18206-201ENSMUST00000207027 926 ntBASIC14.85□□□□□ -0.03
Tpm1P58771 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.85□□□□□ -0.03
Tpm1P58771 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.85□□□□□ -0.03
Tpm1P58771 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.85□□□□□ -0.03
Tpm1P58771 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.85□□□□□ -0.03
Tpm1P58771 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tpm1P58771 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.84□□□□□ -0.03
Tpm1P58771 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.84□□□□□ -0.03
Tpm1P58771 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.84□□□□□ -0.03
Tpm1P58771 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.84□□□□□ -0.03
Tpm1P58771 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.84□□□□□ -0.03
Tpm1P58771 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.84□□□□□ -0.03
Tpm1P58771 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Gm14494-201ENSMUST00000118786 435 ntBASIC14.84□□□□□ -0.03
Tpm1P58771 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Tpm1P58771 Gm18766-201ENSMUST00000189811 808 ntBASIC14.84□□□□□ -0.03
Tpm1P58771 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.84□□□□□ -0.03
Tpm1P58771 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Tpm1P58771 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tpm1P58771 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Tpm1P58771 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tpm1P58771 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Tpm1P58771 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms