Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Sssca1P56873 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Sssca1P56873 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sssca1P56873 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.77□□□□□ -0.68
Sssca1P56873 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.77□□□□□ -0.68
Sssca1P56873 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.77□□□□□ -0.68
Sssca1P56873 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sssca1P56873 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Sssca1P56873 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Sssca1P56873 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Gm8410-201ENSMUST00000117225 605 ntBASIC10.77□□□□□ -0.69
Sssca1P56873 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Gm5425-201ENSMUST00000214125 459 ntBASIC10.77□□□□□ -0.69
Sssca1P56873 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sssca1P56873 Gm9229-201ENSMUST00000222777 126 ntBASIC10.77□□□□□ -0.69
Sssca1P56873 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Sssca1P56873 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.77□□□□□ -0.69
Sssca1P56873 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.77□□□□□ -0.69
Sssca1P56873 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sssca1P56873 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.77□□□□□ -0.69
Sssca1P56873 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sssca1P56873 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sssca1P56873 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Sssca1P56873 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.76□□□□□ -0.69
Sssca1P56873 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.76□□□□□ -0.69
Sssca1P56873 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sssca1P56873 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sssca1P56873 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sssca1P56873 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.76□□□□□ -0.69
Sssca1P56873 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.76□□□□□ -0.69
Sssca1P56873 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.76□□□□□ -0.69
Sssca1P56873 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.76□□□□□ -0.69
Sssca1P56873 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.76□□□□□ -0.69
Sssca1P56873 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sssca1P56873 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.76□□□□□ -0.69
Sssca1P56873 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms