Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
Lim2P56563 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lim2P56563 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.33□□□□□ -0.28
Lim2P56563 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.33□□□□□ -0.28
Lim2P56563 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Lim2P56563 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lim2P56563 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.33□□□□□ -0.28
Lim2P56563 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lim2P56563 Gm5356-201ENSMUST00000093326 615 ntBASIC13.33□□□□□ -0.28
Lim2P56563 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lim2P56563 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.33□□□□□ -0.28
Lim2P56563 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.33□□□□□ -0.28
Lim2P56563 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.33□□□□□ -0.28
Lim2P56563 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lim2P56563 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Lim2P56563 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.32□□□□□ -0.28
Lim2P56563 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lim2P56563 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lim2P56563 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lim2P56563 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lim2P56563 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.32□□□□□ -0.28
Lim2P56563 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.32□□□□□ -0.28
Lim2P56563 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.32□□□□□ -0.28
Lim2P56563 Gm27892-201ENSMUST00000185017 106 ntBASIC13.32□□□□□ -0.28
Lim2P56563 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.32□□□□□ -0.28
Lim2P56563 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lim2P56563 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lim2P56563 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lim2P56563 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lim2P56563 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lim2P56563 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lim2P56563 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.31□□□□□ -0.28
Lim2P56563 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lim2P56563 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Gm6244-201ENSMUST00000178732 841 ntBASIC13.31□□□□□ -0.28
Lim2P56563 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Lim2P56563 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.31□□□□□ -0.28
Lim2P56563 Gm26315-201ENSMUST00000083890 321 ntBASIC13.31□□□□□ -0.28
Lim2P56563 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Lim2P56563 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lim2P56563 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms