Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Cdh11P55288 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Cdh11P55288 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.17□□□□□ -0.46
Cdh11P55288 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Gm33320-201ENSMUST00000192232 530 ntBASIC12.17□□□□□ -0.46
Cdh11P55288 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.17□□□□□ -0.46
Cdh11P55288 Gm6916-202ENSMUST00000205523 195 ntBASIC12.17□□□□□ -0.46
Cdh11P55288 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cdh11P55288 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cdh11P55288 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdh11P55288 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdh11P55288 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdh11P55288 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.17□□□□□ -0.46
Cdh11P55288 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.17□□□□□ -0.46
Cdh11P55288 BC001981-202ENSMUST00000191393 1545 ntBASIC12.16□□□□□ -0.46
Cdh11P55288 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cdh11P55288 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdh11P55288 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdh11P55288 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cdh11P55288 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cdh11P55288 Gm9522-201ENSMUST00000182394 926 ntBASIC12.16□□□□□ -0.46
Cdh11P55288 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdh11P55288 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdh11P55288 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdh11P55288 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdh11P55288 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdh11P55288 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdh11P55288 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdh11P55288 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdh11P55288 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdh11P55288 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.15□□□□□ -0.46
Cdh11P55288 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdh11P55288 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cdh11P55288 Gm12859-201ENSMUST00000117834 427 ntBASIC12.15□□□□□ -0.46
Cdh11P55288 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdh11P55288 Gm15393-201ENSMUST00000120499 219 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms