Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm45186-201ENSMUST00000206874 478 ntBASIC16.76■□□□□ 0.27
Msh6P54276 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.76■□□□□ 0.27
Msh6P54276 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.76■□□□□ 0.27
Msh6P54276 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.75■□□□□ 0.27
Msh6P54276 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.75■□□□□ 0.27
Msh6P54276 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.75■□□□□ 0.27
Msh6P54276 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.75■□□□□ 0.27
Msh6P54276 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Msh6P54276 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.75■□□□□ 0.27
Msh6P54276 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Gm12176-201ENSMUST00000121420 875 ntBASIC16.75■□□□□ 0.27
Msh6P54276 Gm13316-201ENSMUST00000140537 691 ntBASIC16.75■□□□□ 0.27
Msh6P54276 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.75■□□□□ 0.27
Msh6P54276 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.75■□□□□ 0.27
Msh6P54276 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.75■□□□□ 0.27
Msh6P54276 Nsd1-205ENSMUST00000224693 852 ntBASIC16.75■□□□□ 0.27
Msh6P54276 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh6P54276 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Msh6P54276 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.74■□□□□ 0.27
Msh6P54276 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Msh6P54276 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Msh6P54276 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.74■□□□□ 0.27
Msh6P54276 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Msh6P54276 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Msh6P54276 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Gm24830-201ENSMUST00000102024 166 ntBASIC16.74■□□□□ 0.27
Msh6P54276 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Msh6P54276 Gm25890-201ENSMUST00000177643 165 ntBASIC16.74■□□□□ 0.27
Msh6P54276 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.74■□□□□ 0.27
Msh6P54276 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.74■□□□□ 0.27
Msh6P54276 Gm22614-201ENSMUST00000178300 165 ntBASIC16.74■□□□□ 0.27
Msh6P54276 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.74■□□□□ 0.27
Msh6P54276 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Msh6P54276 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.74■□□□□ 0.27
Msh6P54276 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Msh6P54276 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Gm22042-201ENSMUST00000082989 165 ntBASIC16.74■□□□□ 0.27
Msh6P54276 Gm26232-201ENSMUST00000083360 166 ntBASIC16.74■□□□□ 0.27
Msh6P54276 Gm24136-201ENSMUST00000083374 165 ntBASIC16.74■□□□□ 0.27
Msh6P54276 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.74■□□□□ 0.27
Msh6P54276 Gm26110-201ENSMUST00000083971 165 ntBASIC16.74■□□□□ 0.27
Msh6P54276 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Msh6P54276 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Msh6P54276 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.74■□□□□ 0.27
Msh6P54276 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh6P54276 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Msh6P54276 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.73■□□□□ 0.27
Msh6P54276 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Msh6P54276 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.73■□□□□ 0.27
Msh6P54276 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Msh6P54276 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.73■□□□□ 0.27
Msh6P54276 Gm14726-201ENSMUST00000120623 896 ntBASIC16.73■□□□□ 0.27
Msh6P54276 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.73■□□□□ 0.27
Msh6P54276 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.73■□□□□ 0.27
Msh6P54276 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms