Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Fdft1P53798 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.33□□□□□ -0.28
Fdft1P53798 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.33□□□□□ -0.28
Fdft1P53798 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Fdft1P53798 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.33□□□□□ -0.28
Fdft1P53798 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Fdft1P53798 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Fdft1P53798 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Fdft1P53798 Gm21854-201ENSMUST00000179901 471 ntBASIC13.33□□□□□ -0.28
Fdft1P53798 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.33□□□□□ -0.28
Fdft1P53798 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.33□□□□□ -0.28
Fdft1P53798 Gm9797-201ENSMUST00000052902 613 ntBASIC13.33□□□□□ -0.28
Fdft1P53798 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Fdft1P53798 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Fdft1P53798 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Fdft1P53798 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fdft1P53798 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Fdft1P53798 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Fdft1P53798 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Fdft1P53798 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Fdft1P53798 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.32□□□□□ -0.28
Fdft1P53798 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Fdft1P53798 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.32□□□□□ -0.28
Fdft1P53798 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.32□□□□□ -0.28
Fdft1P53798 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.32□□□□□ -0.28
Fdft1P53798 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.32□□□□□ -0.28
Fdft1P53798 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Fdft1P53798 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.32□□□□□ -0.28
Fdft1P53798 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Syt7-204ENSMUST00000223586 1344 ntBASIC13.32□□□□□ -0.28
Fdft1P53798 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Fdft1P53798 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.32□□□□□ -0.28
Fdft1P53798 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fdft1P53798 Pck2-205ENSMUST00000226352 2784 ntBASIC13.32□□□□□ -0.28
Fdft1P53798 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.31□□□□□ -0.28
Fdft1P53798 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Fdft1P53798 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Gm14057-201ENSMUST00000120631 482 ntBASIC13.31□□□□□ -0.28
Fdft1P53798 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.31□□□□□ -0.28
Fdft1P53798 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Gm24694-201ENSMUST00000180054 110 ntBASIC13.31□□□□□ -0.28
Fdft1P53798 Gm27663-201ENSMUST00000184839 110 ntBASIC13.31□□□□□ -0.28
Fdft1P53798 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.31□□□□□ -0.28
Fdft1P53798 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.31□□□□□ -0.28
Fdft1P53798 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.31□□□□□ -0.28
Fdft1P53798 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Fdft1P53798 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms