Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.62□□□□□ -0.39
RoraP51448 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.62□□□□□ -0.39
RoraP51448 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Gm45841-201ENSMUST00000207700 164 ntBASIC12.62□□□□□ -0.39
RoraP51448 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.62□□□□□ -0.39
RoraP51448 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.62□□□□□ -0.39
RoraP51448 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.62□□□□□ -0.39
RoraP51448 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RoraP51448 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RoraP51448 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RoraP51448 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.61□□□□□ -0.39
RoraP51448 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Gm37424-201ENSMUST00000191727 561 ntBASIC12.61□□□□□ -0.39
RoraP51448 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.61□□□□□ -0.39
RoraP51448 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.61□□□□□ -0.39
RoraP51448 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.61□□□□□ -0.39
RoraP51448 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.61□□□□□ -0.39
RoraP51448 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
RoraP51448 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RoraP51448 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RoraP51448 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RoraP51448 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RoraP51448 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RoraP51448 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.6□□□□□ -0.39
RoraP51448 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RoraP51448 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RoraP51448 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.6□□□□□ -0.39
RoraP51448 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.6□□□□□ -0.39
RoraP51448 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
RoraP51448 Gm16177-201ENSMUST00000120728 718 ntBASIC12.6□□□□□ -0.39
RoraP51448 Gm8062-201ENSMUST00000139696 444 ntBASIC12.6□□□□□ -0.39
RoraP51448 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.6□□□□□ -0.39
RoraP51448 Gm27331-201ENSMUST00000183705 60 ntBASIC12.6□□□□□ -0.39
RoraP51448 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.6□□□□□ -0.39
RoraP51448 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.6□□□□□ -0.39
RoraP51448 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.6□□□□□ -0.39
RoraP51448 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.6□□□□□ -0.39
RoraP51448 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RoraP51448 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RoraP51448 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RoraP51448 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.6□□□□□ -0.39
RoraP51448 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RoraP51448 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms