Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Gm6244-201ENSMUST00000178732 841 ntBASIC15.82■□□□□ 0.12
Ercc3P49135 Gm8602-201ENSMUST00000184045 607 ntBASIC15.82■□□□□ 0.12
Ercc3P49135 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.82■□□□□ 0.12
Ercc3P49135 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ercc3P49135 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ercc3P49135 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.82■□□□□ 0.12
Ercc3P49135 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ercc3P49135 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.82■□□□□ 0.12
Ercc3P49135 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.82■□□□□ 0.12
Ercc3P49135 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.81■□□□□ 0.12
Ercc3P49135 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.81■□□□□ 0.12
Ercc3P49135 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Ercc3P49135 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.81■□□□□ 0.12
Ercc3P49135 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.81■□□□□ 0.12
Ercc3P49135 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.81■□□□□ 0.12
Ercc3P49135 Gm44397-201ENSMUST00000195950 113 ntBASIC15.81■□□□□ 0.12
Ercc3P49135 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.81■□□□□ 0.12
Ercc3P49135 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.81■□□□□ 0.12
Ercc3P49135 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Ercc3P49135 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.81■□□□□ 0.12
Ercc3P49135 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ercc3P49135 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.8■□□□□ 0.12
Ercc3P49135 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.8■□□□□ 0.12
Ercc3P49135 Gm15806-201ENSMUST00000120696 955 ntBASIC15.8■□□□□ 0.12
Ercc3P49135 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Gm27839-201ENSMUST00000184242 106 ntBASIC15.8■□□□□ 0.12
Ercc3P49135 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.8■□□□□ 0.12
Ercc3P49135 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.8■□□□□ 0.12
Ercc3P49135 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.8■□□□□ 0.12
Ercc3P49135 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.8■□□□□ 0.12
Ercc3P49135 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Gm5356-201ENSMUST00000093326 615 ntBASIC15.8■□□□□ 0.12
Ercc3P49135 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Ercc3P49135 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ercc3P49135 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc3P49135 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Ercc3P49135 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ercc3P49135 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc3P49135 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc3P49135 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.79■□□□□ 0.12
Ercc3P49135 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Ercc3P49135 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc3P49135 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms