Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rfx2P48379 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Gm15770-201ENSMUST00000117498 584 ntBASIC13.97□□□□□ -0.17
Rfx2P48379 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.97□□□□□ -0.17
Rfx2P48379 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.97□□□□□ -0.17
Rfx2P48379 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rfx2P48379 Gm45784-201ENSMUST00000188360 142 ntBASIC13.97□□□□□ -0.17
Rfx2P48379 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.97□□□□□ -0.17
Rfx2P48379 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.97□□□□□ -0.17
Rfx2P48379 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Rfx2P48379 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.97□□□□□ -0.17
Rfx2P48379 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.97□□□□□ -0.17
Rfx2P48379 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.97□□□□□ -0.17
Rfx2P48379 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rfx2P48379 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfx2P48379 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.97□□□□□ -0.17
Rfx2P48379 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rfx2P48379 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rfx2P48379 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rfx2P48379 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Rfx2P48379 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rfx2P48379 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Gm13226-201ENSMUST00000117838 404 ntBASIC13.96□□□□□ -0.17
Rfx2P48379 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.96□□□□□ -0.17
Rfx2P48379 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Gm38144-201ENSMUST00000192790 465 ntBASIC13.96□□□□□ -0.17
Rfx2P48379 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rfx2P48379 Gm7561-201ENSMUST00000211203 886 ntBASIC13.96□□□□□ -0.17
Rfx2P48379 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.96□□□□□ -0.17
Rfx2P48379 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rfx2P48379 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfx2P48379 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.96□□□□□ -0.17
Rfx2P48379 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx2P48379 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.96□□□□□ -0.18
Rfx2P48379 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx2P48379 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx2P48379 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx2P48379 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx2P48379 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx2P48379 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx2P48379 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.96□□□□□ -0.18
Rfx2P48379 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rfx2P48379 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rfx2P48379 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rfx2P48379 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.95□□□□□ -0.18
Rfx2P48379 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rfx2P48379 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfx2P48379 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Gm2445-201ENSMUST00000182798 989 ntBASIC13.95□□□□□ -0.18
Rfx2P48379 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.95□□□□□ -0.18
Rfx2P48379 Gm43630-201ENSMUST00000201550 776 ntBASIC13.95□□□□□ -0.18
Rfx2P48379 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.95□□□□□ -0.18
Rfx2P48379 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.95□□□□□ -0.18
Rfx2P48379 Gm17330-201ENSMUST00000221047 165 ntBASIC13.95□□□□□ -0.18
Rfx2P48379 Gm10012-201ENSMUST00000078252 192 ntBASIC13.95□□□□□ -0.18
Rfx2P48379 Gm6091-201ENSMUST00000098307 165 ntBASIC13.95□□□□□ -0.18
Rfx2P48379 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx2P48379 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms