Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps4bP46467 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps4bP46467 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps4bP46467 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Vps4bP46467 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Vps4bP46467 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Vps4bP46467 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps4bP46467 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps4bP46467 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps4bP46467 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Syt7-205ENSMUST00000224135 1557 ntBASIC13.54□□□□□ -0.24
Vps4bP46467 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.54□□□□□ -0.24
Vps4bP46467 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.54□□□□□ -0.24
Vps4bP46467 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps4bP46467 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.54□□□□□ -0.24
Vps4bP46467 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps4bP46467 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vps4bP46467 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Vps4bP46467 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Vps4bP46467 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Vps4bP46467 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps4bP46467 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Vps4bP46467 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Vps4bP46467 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.53□□□□□ -0.24
Vps4bP46467 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Vps4bP46467 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.53□□□□□ -0.24
Vps4bP46467 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps4bP46467 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Vps4bP46467 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.53□□□□□ -0.24
Vps4bP46467 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps4bP46467 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Vps4bP46467 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps4bP46467 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps4bP46467 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps4bP46467 Gm27306-201ENSMUST00000183970 107 ntBASIC13.53□□□□□ -0.24
Vps4bP46467 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.53□□□□□ -0.24
Vps4bP46467 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vps4bP46467 Gm24447-201ENSMUST00000083977 338 ntBASIC13.53□□□□□ -0.24
Vps4bP46467 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.53□□□□□ -0.24
Vps4bP46467 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.53□□□□□ -0.24
Vps4bP46467 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vps4bP46467 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.53□□□□□ -0.24
Vps4bP46467 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4bP46467 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4bP46467 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Vps4bP46467 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Vps4bP46467 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4bP46467 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4bP46467 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4bP46467 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms