Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkx2-6P43688 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-6P43688 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-6P43688 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-6P43688 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-6P43688 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-6P43688 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-6P43688 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-6P43688 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-6P43688 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-6P43688 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.6□□□□□ -0.39
Nkx2-6P43688 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.6□□□□□ -0.39
Nkx2-6P43688 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.6□□□□□ -0.39
Nkx2-6P43688 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx2-6P43688 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Gm11618-201ENSMUST00000117946 267 ntBASIC12.59□□□□□ -0.39
Nkx2-6P43688 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Gm27572-201ENSMUST00000183702 255 ntBASIC12.59□□□□□ -0.39
Nkx2-6P43688 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.59□□□□□ -0.39
Nkx2-6P43688 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.59□□□□□ -0.39
Nkx2-6P43688 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.59□□□□□ -0.39
Nkx2-6P43688 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-6P43688 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-6P43688 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-6P43688 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-6P43688 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms