Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.93□□□□□ -0.34
TfamP40630 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TfamP40630 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
TfamP40630 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.92□□□□□ -0.34
TfamP40630 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TfamP40630 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TfamP40630 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TfamP40630 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.92□□□□□ -0.34
TfamP40630 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TfamP40630 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.92□□□□□ -0.34
TfamP40630 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TfamP40630 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TfamP40630 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.92□□□□□ -0.34
TfamP40630 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.92□□□□□ -0.34
TfamP40630 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
TfamP40630 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Gm9522-201ENSMUST00000182394 926 ntBASIC12.92□□□□□ -0.34
TfamP40630 Gm27306-201ENSMUST00000183970 107 ntBASIC12.92□□□□□ -0.34
TfamP40630 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.92□□□□□ -0.34
TfamP40630 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.92□□□□□ -0.34
TfamP40630 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TfamP40630 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.92□□□□□ -0.34
TfamP40630 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TfamP40630 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.91□□□□□ -0.34
TfamP40630 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TfamP40630 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TfamP40630 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.91□□□□□ -0.34
TfamP40630 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Gm27989-201ENSMUST00000184721 107 ntBASIC12.91□□□□□ -0.34
TfamP40630 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.91□□□□□ -0.34
TfamP40630 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.91□□□□□ -0.34
TfamP40630 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TfamP40630 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TfamP40630 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
TfamP40630 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.91□□□□□ -0.34
TfamP40630 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.91□□□□□ -0.34
TfamP40630 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TfamP40630 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms