Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sox5P35710 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.56□□□□□ -0.08
Sox5P35710 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.56□□□□□ -0.08
Sox5P35710 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Sox5P35710 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.56□□□□□ -0.08
Sox5P35710 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sox5P35710 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.56□□□□□ -0.08
Sox5P35710 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox5P35710 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.56□□□□□ -0.08
Sox5P35710 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sox5P35710 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox5P35710 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox5P35710 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox5P35710 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox5P35710 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sox5P35710 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.55□□□□□ -0.08
Sox5P35710 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.55□□□□□ -0.08
Sox5P35710 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox5P35710 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sox5P35710 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sox5P35710 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox5P35710 Gm2213-201ENSMUST00000197485 688 ntBASIC14.55□□□□□ -0.08
Sox5P35710 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.55□□□□□ -0.08
Sox5P35710 Gm17795-201ENSMUST00000214505 757 ntBASIC14.55□□□□□ -0.08
Sox5P35710 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.55□□□□□ -0.08
Sox5P35710 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Gm24447-201ENSMUST00000083977 338 ntBASIC14.55□□□□□ -0.08
Sox5P35710 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sox5P35710 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.55□□□□□ -0.08
Sox5P35710 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sox5P35710 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Sox5P35710 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox5P35710 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Sox5P35710 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox5P35710 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Sox5P35710 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.54□□□□□ -0.08
Sox5P35710 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox5P35710 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Gm13223-201ENSMUST00000118609 747 ntBASIC14.54□□□□□ -0.08
Sox5P35710 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.54□□□□□ -0.08
Sox5P35710 Gm17837-201ENSMUST00000186435 985 ntBASIC14.54□□□□□ -0.08
Sox5P35710 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.54□□□□□ -0.08
Sox5P35710 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.54□□□□□ -0.08
Sox5P35710 Gm9063-201ENSMUST00000223299 582 ntBASIC14.54□□□□□ -0.08
Sox5P35710 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sox5P35710 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms