Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.33□□□□□ -0.44
Cd40lgP27548 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.32□□□□□ -0.44
Cd40lgP27548 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.32□□□□□ -0.44
Cd40lgP27548 Gm45668-201ENSMUST00000211271 493 ntBASIC12.32□□□□□ -0.44
Cd40lgP27548 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cd40lgP27548 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.32□□□□□ -0.44
Cd40lgP27548 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40lgP27548 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.31□□□□□ -0.44
Cd40lgP27548 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cd40lgP27548 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Cd40lgP27548 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Cd40lgP27548 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Gm15770-201ENSMUST00000117498 584 ntBASIC12.31□□□□□ -0.44
Cd40lgP27548 Gm12485-201ENSMUST00000119641 291 ntBASIC12.31□□□□□ -0.44
Cd40lgP27548 Gm11918-201ENSMUST00000121660 179 ntBASIC12.31□□□□□ -0.44
Cd40lgP27548 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.31□□□□□ -0.44
Cd40lgP27548 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.31□□□□□ -0.44
Cd40lgP27548 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.31□□□□□ -0.44
Cd40lgP27548 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.31□□□□□ -0.44
Cd40lgP27548 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.31□□□□□ -0.44
Cd40lgP27548 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cd40lgP27548 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Cd40lgP27548 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cd40lgP27548 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Cd40lgP27548 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.31□□□□□ -0.44
Cd40lgP27548 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40lgP27548 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Cd40lgP27548 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40lgP27548 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40lgP27548 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40lgP27548 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40lgP27548 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40lgP27548 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40lgP27548 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cd40lgP27548 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40lgP27548 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cd40lgP27548 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms