Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm11618-201ENSMUST00000117946 267 ntBASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm1335-201ENSMUST00000121653 386 ntBASIC13.69□□□□□ -0.22
Nfkb1P25799 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm27572-201ENSMUST00000183702 255 ntBASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm27682-201ENSMUST00000183930 110 ntBASIC13.69□□□□□ -0.22
Nfkb1P25799 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nfkb1P25799 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nfkb1P25799 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.68□□□□□ -0.22
Nfkb1P25799 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.68□□□□□ -0.22
Nfkb1P25799 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Gm5187-201ENSMUST00000117317 991 ntBASIC13.68□□□□□ -0.22
Nfkb1P25799 Gm37922-201ENSMUST00000195596 455 ntBASIC13.68□□□□□ -0.22
Nfkb1P25799 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.68□□□□□ -0.22
Nfkb1P25799 Gm45331-201ENSMUST00000209868 554 ntBASIC13.68□□□□□ -0.22
Nfkb1P25799 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.68□□□□□ -0.22
Nfkb1P25799 Gm16372-201ENSMUST00000073088 450 ntBASIC13.68□□□□□ -0.22
Nfkb1P25799 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nfkb1P25799 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nfkb1P25799 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nfkb1P25799 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nfkb1P25799 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.67□□□□□ -0.22
Nfkb1P25799 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.67□□□□□ -0.22
Nfkb1P25799 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nfkb1P25799 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nfkb1P25799 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
Nfkb1P25799 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.67□□□□□ -0.22
Nfkb1P25799 Gm6447-201ENSMUST00000118905 835 ntBASIC13.67□□□□□ -0.22
Nfkb1P25799 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nfkb1P25799 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Nfkb1P25799 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms