Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TP20293 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TP20293 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TP20293 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.57□□□□□ -0.4
TP20293 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.57□□□□□ -0.4
TP20293 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.57□□□□□ -0.4
TP20293 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TP20293 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TP20293 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TP20293 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TP20293 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.57□□□□□ -0.4
TP20293 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TP20293 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TP20293 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.56□□□□□ -0.4
TP20293 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Gm12859-201ENSMUST00000117834 427 ntBASIC12.56□□□□□ -0.4
TP20293 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.56□□□□□ -0.4
TP20293 Gm43094-201ENSMUST00000196549 921 ntBASIC12.56□□□□□ -0.4
TP20293 Gm19078-201ENSMUST00000206311 727 ntBASIC12.56□□□□□ -0.4
TP20293 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.56□□□□□ -0.4
TP20293 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TP20293 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.56□□□□□ -0.4
TP20293 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TP20293 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TP20293 Paupar-201ENSMUST00000194826 3482 ntBASIC12.56□□□□□ -0.4
TP20293 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
TP20293 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TP20293 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TP20293 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TP20293 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TP20293 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TP20293 Gm11524-201ENSMUST00000119349 807 ntBASIC12.55□□□□□ -0.4
TP20293 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.55□□□□□ -0.4
TP20293 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TP20293 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms