Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cd48P18181 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cd48P18181 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cd48P18181 Gm24245-201ENSMUST00000157318 57 ntBASIC11.98□□□□□ -0.49
Cd48P18181 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cd48P18181 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Cd48P18181 Gm17837-201ENSMUST00000186435 985 ntBASIC11.98□□□□□ -0.49
Cd48P18181 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.98□□□□□ -0.49
Cd48P18181 Gm6888-201ENSMUST00000221983 706 ntBASIC11.98□□□□□ -0.49
Cd48P18181 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cd48P18181 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cd48P18181 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Cd48P18181 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd48P18181 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cd48P18181 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.97□□□□□ -0.49
Cd48P18181 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cd48P18181 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cd48P18181 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.97□□□□□ -0.49
Cd48P18181 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cd48P18181 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cd48P18181 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
Cd48P18181 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Cd48P18181 Gm27618-201ENSMUST00000183671 60 ntBASIC11.96□□□□□ -0.49
Cd48P18181 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.96□□□□□ -0.49
Cd48P18181 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Cd48P18181 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.96□□□□□ -0.49
Cd48P18181 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.96□□□□□ -0.49
Cd48P18181 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Cd48P18181 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cd48P18181 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cd48P18181 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms