Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm27989-201ENSMUST00000184721 107 ntBASIC14.43□□□□□ -0.1
RaraP11416 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.43□□□□□ -0.1
RaraP11416 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.43□□□□□ -0.1
RaraP11416 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 Gm5161-201ENSMUST00000075243 853 ntBASIC14.43□□□□□ -0.1
RaraP11416 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
RaraP11416 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.43□□□□□ -0.1
RaraP11416 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RaraP11416 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.42□□□□□ -0.1
RaraP11416 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RaraP11416 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.42□□□□□ -0.1
RaraP11416 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.42□□□□□ -0.1
RaraP11416 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.42□□□□□ -0.1
RaraP11416 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.42□□□□□ -0.1
RaraP11416 Gm19891-201ENSMUST00000189771 303 ntBASIC14.42□□□□□ -0.1
RaraP11416 Gm29667-201ENSMUST00000190817 490 ntBASIC14.42□□□□□ -0.1
RaraP11416 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.42□□□□□ -0.1
RaraP11416 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RaraP11416 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.42□□□□□ -0.1
RaraP11416 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.42□□□□□ -0.1
RaraP11416 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.42□□□□□ -0.1
RaraP11416 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.42□□□□□ -0.1
RaraP11416 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RaraP11416 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RaraP11416 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.41□□□□□ -0.1
RaraP11416 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.41□□□□□ -0.1
RaraP11416 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.41□□□□□ -0.1
RaraP11416 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Gm15487-201ENSMUST00000122373 465 ntBASIC14.41□□□□□ -0.1
RaraP11416 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.41□□□□□ -0.1
RaraP11416 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.41□□□□□ -0.1
RaraP11416 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.41□□□□□ -0.1
RaraP11416 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.41□□□□□ -0.1
RaraP11416 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RaraP11416 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RaraP11416 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RaraP11416 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.4□□□□□ -0.1
RaraP11416 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.4□□□□□ -0.1
RaraP11416 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RaraP11416 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RaraP11416 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms