Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.61□□□□□ -0.55
UbbP0CG49 Gm8000-201ENSMUST00000188378 592 ntBASIC11.61□□□□□ -0.55
UbbP0CG49 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.61□□□□□ -0.55
UbbP0CG49 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
UbbP0CG49 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
UbbP0CG49 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
UbbP0CG49 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
UbbP0CG49 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.61□□□□□ -0.55
UbbP0CG49 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
UbbP0CG49 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
UbbP0CG49 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.6□□□□□ -0.55
UbbP0CG49 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.6□□□□□ -0.55
UbbP0CG49 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
UbbP0CG49 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.6□□□□□ -0.55
UbbP0CG49 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
UbbP0CG49 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
UbbP0CG49 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.6□□□□□ -0.55
UbbP0CG49 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.6□□□□□ -0.55
UbbP0CG49 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.6□□□□□ -0.55
UbbP0CG49 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.6□□□□□ -0.55
UbbP0CG49 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Gm10253-201ENSMUST00000194270 940 ntBASIC11.6□□□□□ -0.55
UbbP0CG49 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.6□□□□□ -0.55
UbbP0CG49 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.6□□□□□ -0.55
UbbP0CG49 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
UbbP0CG49 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.6□□□□□ -0.55
UbbP0CG49 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UbbP0CG49 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
UbbP0CG49 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
UbbP0CG49 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
UbbP0CG49 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.59□□□□□ -0.55
UbbP0CG49 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
UbbP0CG49 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.59□□□□□ -0.55
UbbP0CG49 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
UbbP0CG49 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.59□□□□□ -0.55
UbbP0CG49 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Gm6912-201ENSMUST00000117218 544 ntBASIC11.59□□□□□ -0.55
UbbP0CG49 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.59□□□□□ -0.55
UbbP0CG49 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.59□□□□□ -0.55
UbbP0CG49 Gm25911-201ENSMUST00000157621 56 ntBASIC11.59□□□□□ -0.55
UbbP0CG49 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
UbbP0CG49 Gm10766-202ENSMUST00000194123 606 ntBASIC11.59□□□□□ -0.55
UbbP0CG49 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.59□□□□□ -0.55
UbbP0CG49 Gm43474-201ENSMUST00000196415 774 ntBASIC11.59□□□□□ -0.55
UbbP0CG49 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.59□□□□□ -0.55
UbbP0CG49 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.59□□□□□ -0.55
UbbP0CG49 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.59□□□□□ -0.55
UbbP0CG49 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
UbbP0CG49 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
UbbP0CG49 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms