Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.14■□□□□ 0.33
Hoxc9P09633 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Gm12012-201ENSMUST00000118857 1066 ntBASIC17.14■□□□□ 0.33
Hoxc9P09633 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.14■□□□□ 0.33
Hoxc9P09633 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Gm5950-201ENSMUST00000213337 772 ntBASIC17.14■□□□□ 0.33
Hoxc9P09633 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hoxc9P09633 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC17.14■□□□□ 0.33
Hoxc9P09633 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.14■□□□□ 0.33
Hoxc9P09633 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hoxc9P09633 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hoxc9P09633 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Hoxc9P09633 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Hoxc9P09633 Gm19221-201ENSMUST00000221827 1477 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hoxc9P09633 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hoxc9P09633 Gm23270-201ENSMUST00000104055 131 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.13■□□□□ 0.33
Hoxc9P09633 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.13■□□□□ 0.33
Hoxc9P09633 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Mir5132-201ENSMUST00000175166 71 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Mir7221-201ENSMUST00000184009 72 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC17.13■□□□□ 0.33
Hoxc9P09633 Gm31256-201ENSMUST00000194705 506 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC17.13■□□□□ 0.33
Hoxc9P09633 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Gm45186-201ENSMUST00000206874 478 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC17.13■□□□□ 0.33
Hoxc9P09633 Gm9004-201ENSMUST00000218739 1222 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.13■□□□□ 0.33
Hoxc9P09633 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Hoxc9P09633 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxc9P09633 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.12■□□□□ 0.33
Hoxc9P09633 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Gm13875-201ENSMUST00000120162 282 ntBASIC17.12■□□□□ 0.33
Hoxc9P09633 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hoxc9P09633 Gm26956-201ENSMUST00000182176 986 ntBASIC17.12■□□□□ 0.33
Hoxc9P09633 Gm2546-201ENSMUST00000182630 991 ntBASIC17.12■□□□□ 0.33
Hoxc9P09633 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC17.12■□□□□ 0.33
Hoxc9P09633 Gm38092-201ENSMUST00000195600 653 ntBASIC17.12■□□□□ 0.33
Hoxc9P09633 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.12■□□□□ 0.33
Hoxc9P09633 Gm8099-201ENSMUST00000200510 742 ntBASIC17.12■□□□□ 0.33
Hoxc9P09633 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.12■□□□□ 0.33
Hoxc9P09633 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.12■□□□□ 0.33
Hoxc9P09633 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hoxc9P09633 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.12■□□□□ 0.33
Hoxc9P09633 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxc9P09633 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms