Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TnfP06804 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TnfP06804 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TnfP06804 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.11□□□□□ -0.15
TnfP06804 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TnfP06804 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TnfP06804 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.1□□□□□ -0.15
TnfP06804 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.1□□□□□ -0.15
TnfP06804 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.1□□□□□ -0.15
TnfP06804 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
TnfP06804 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TnfP06804 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TnfP06804 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TnfP06804 Mir686-201ENSMUST00000102174 109 ntBASIC14.1□□□□□ -0.15
TnfP06804 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TnfP06804 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.1□□□□□ -0.15
TnfP06804 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.1□□□□□ -0.15
TnfP06804 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.1□□□□□ -0.15
TnfP06804 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
TnfP06804 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TnfP06804 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.1□□□□□ -0.15
TnfP06804 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.1□□□□□ -0.15
TnfP06804 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TnfP06804 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.1□□□□□ -0.15
TnfP06804 Gm45880-201ENSMUST00000213041 853 ntBASIC14.1□□□□□ -0.15
TnfP06804 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TnfP06804 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TnfP06804 Snora73a-201ENSMUST00000082453 205 ntBASIC14.1□□□□□ -0.15
TnfP06804 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.1□□□□□ -0.15
TnfP06804 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TnfP06804 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnfP06804 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.09□□□□□ -0.15
TnfP06804 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.09□□□□□ -0.15
TnfP06804 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TnfP06804 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TnfP06804 Gm16479-201ENSMUST00000121706 932 ntBASIC14.09□□□□□ -0.15
TnfP06804 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.09□□□□□ -0.15
TnfP06804 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.09□□□□□ -0.15
TnfP06804 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.09□□□□□ -0.15
TnfP06804 Gm37008-201ENSMUST00000195712 319 ntBASIC14.09□□□□□ -0.15
TnfP06804 Gm19184-201ENSMUST00000196798 928 ntBASIC14.09□□□□□ -0.15
TnfP06804 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.09□□□□□ -0.15
TnfP06804 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TnfP06804 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.09□□□□□ -0.15
TnfP06804 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.09□□□□□ -0.15
TnfP06804 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.09□□□□□ -0.15
TnfP06804 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.09□□□□□ -0.15
TnfP06804 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms