Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Gm10012-201ENSMUST00000078252 192 ntBASIC12.09□□□□□ -0.47
Lmx1bO88609 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.09□□□□□ -0.47
Lmx1bO88609 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lmx1bO88609 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lmx1bO88609 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.09□□□□□ -0.47
Lmx1bO88609 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmx1bO88609 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lmx1bO88609 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Lmx1bO88609 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm12957-201ENSMUST00000117835 377 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm12403-201ENSMUST00000121384 959 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm29649-201ENSMUST00000185649 419 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm8598-201ENSMUST00000221184 836 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.08□□□□□ -0.48
Lmx1bO88609 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.08□□□□□ -0.48
Lmx1bO88609 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.08□□□□□ -0.48
Lmx1bO88609 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmx1bO88609 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.07□□□□□ -0.48
Lmx1bO88609 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm12742-201ENSMUST00000117326 410 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Lmx1bO88609 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm11803-201ENSMUST00000119966 444 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm6152-201ENSMUST00000151704 340 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm27731-201ENSMUST00000185192 107 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.07□□□□□ -0.48
Lmx1bO88609 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm18473-201ENSMUST00000220543 868 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Gm17330-201ENSMUST00000221047 165 ntBASIC12.07□□□□□ -0.48
Lmx1bO88609 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmx1bO88609 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms