Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10226O88253 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Gm10226O88253 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10226O88253 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10226O88253 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10226O88253 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10226O88253 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10226O88253 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10226O88253 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm10226O88253 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10226O88253 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Gm10226O88253 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Gm10226O88253 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Gm10226O88253 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.25□□□□□ -0.77
Gm10226O88253 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Gm10226O88253 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.25□□□□□ -0.77
Gm10226O88253 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.25□□□□□ -0.77
Gm10226O88253 Gm2231-201ENSMUST00000125661 612 ntBASIC10.25□□□□□ -0.77
Gm10226O88253 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.25□□□□□ -0.77
Gm10226O88253 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.25□□□□□ -0.77
Gm10226O88253 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Gm10226O88253 Gm28693-202ENSMUST00000190758 331 ntBASIC10.25□□□□□ -0.77
Gm10226O88253 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Gm10226O88253 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.25□□□□□ -0.77
Gm10226O88253 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Gm10226O88253 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.77
Gm10226O88253 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Gm10226O88253 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.25□□□□□ -0.77
Gm10226O88253 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.25□□□□□ -0.77
Gm10226O88253 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Gm10226O88253 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Gm10226O88253 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.25□□□□□ -0.77
Gm10226O88253 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.25□□□□□ -0.77
Gm10226O88253 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10226O88253 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.24□□□□□ -0.77
Gm10226O88253 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.24□□□□□ -0.77
Gm10226O88253 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.24□□□□□ -0.77
Gm10226O88253 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.24□□□□□ -0.77
Gm10226O88253 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.24□□□□□ -0.77
Gm10226O88253 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Gm11637-201ENSMUST00000120601 592 ntBASIC10.24□□□□□ -0.77
Gm10226O88253 Gm1335-201ENSMUST00000121653 386 ntBASIC10.24□□□□□ -0.77
Gm10226O88253 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Gm26927-201ENSMUST00000182385 965 ntBASIC10.24□□□□□ -0.77
Gm10226O88253 Gm27682-201ENSMUST00000183930 110 ntBASIC10.24□□□□□ -0.77
Gm10226O88253 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.24□□□□□ -0.77
Gm10226O88253 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.24□□□□□ -0.77
Gm10226O88253 Gm6458-201ENSMUST00000211573 635 ntBASIC10.24□□□□□ -0.77
Gm10226O88253 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.24□□□□□ -0.77
Gm10226O88253 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
Gm10226O88253 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Gm10226O88253 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Gm10226O88253 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Gm10226O88253 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Gm10226O88253 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10226O88253 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms