Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Kcnu1O54982 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Kcnu1O54982 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.19□□□□□ -0.14
Kcnu1O54982 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Kcnu1O54982 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Kcnu1O54982 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Kcnu1O54982 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Kcnu1O54982 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.19□□□□□ -0.14
Kcnu1O54982 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Kcnu1O54982 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.19□□□□□ -0.14
Kcnu1O54982 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.19□□□□□ -0.14
Kcnu1O54982 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Kcnu1O54982 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.19□□□□□ -0.14
Kcnu1O54982 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Kcnu1O54982 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Kcnu1O54982 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Kcnu1O54982 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.18□□□□□ -0.14
Kcnu1O54982 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.18□□□□□ -0.14
Kcnu1O54982 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.18□□□□□ -0.14
Kcnu1O54982 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Kcnu1O54982 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.18□□□□□ -0.14
Kcnu1O54982 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.18□□□□□ -0.14
Kcnu1O54982 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Kcnu1O54982 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.18□□□□□ -0.14
Kcnu1O54982 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.18□□□□□ -0.14
Kcnu1O54982 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.18□□□□□ -0.14
Kcnu1O54982 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.18□□□□□ -0.14
Kcnu1O54982 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.18□□□□□ -0.14
Kcnu1O54982 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.18□□□□□ -0.14
Kcnu1O54982 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Kcnu1O54982 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Kcnu1O54982 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Kcnu1O54982 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Kcnu1O54982 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Kcnu1O54982 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.17□□□□□ -0.14
Kcnu1O54982 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Kcnu1O54982 Gm14057-201ENSMUST00000120631 482 ntBASIC14.17□□□□□ -0.14
Kcnu1O54982 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.17□□□□□ -0.14
Kcnu1O54982 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.17□□□□□ -0.14
Kcnu1O54982 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.17□□□□□ -0.14
Kcnu1O54982 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.17□□□□□ -0.14
Kcnu1O54982 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.17□□□□□ -0.14
Kcnu1O54982 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.17□□□□□ -0.14
Kcnu1O54982 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.17□□□□□ -0.14
Kcnu1O54982 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Kcnu1O54982 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Kcnu1O54982 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms