Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.09□□□□□ -0.47
Rnf13O54965 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.09□□□□□ -0.47
Rnf13O54965 Gm15770-201ENSMUST00000117498 584 ntBASIC12.09□□□□□ -0.47
Rnf13O54965 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rnf13O54965 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Gm24420-201ENSMUST00000176676 59 ntBASIC12.09□□□□□ -0.47
Rnf13O54965 Gm4804-201ENSMUST00000182234 999 ntBASIC12.09□□□□□ -0.47
Rnf13O54965 Gm28630-201ENSMUST00000187806 498 ntBASIC12.09□□□□□ -0.47
Rnf13O54965 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.09□□□□□ -0.47
Rnf13O54965 Gm9229-201ENSMUST00000222777 126 ntBASIC12.09□□□□□ -0.47
Rnf13O54965 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rnf13O54965 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rnf13O54965 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rnf13O54965 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf13O54965 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.09□□□□□ -0.47
Rnf13O54965 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf13O54965 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf13O54965 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf13O54965 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf13O54965 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf13O54965 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rnf13O54965 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.08□□□□□ -0.48
Rnf13O54965 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Gm6912-201ENSMUST00000117218 544 ntBASIC12.08□□□□□ -0.48
Rnf13O54965 Gm15393-201ENSMUST00000120499 219 ntBASIC12.08□□□□□ -0.48
Rnf13O54965 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf13O54965 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.08□□□□□ -0.48
Rnf13O54965 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rnf13O54965 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rnf13O54965 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.08□□□□□ -0.48
Rnf13O54965 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rnf13O54965 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.08□□□□□ -0.48
Rnf13O54965 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf13O54965 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rnf13O54965 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rnf13O54965 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf13O54965 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf13O54965 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rnf13O54965 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf13O54965 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf13O54965 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms