Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Banf1O54962 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.56□□□□□ -0.24
Banf1O54962 Gm5425-201ENSMUST00000214125 459 ntBASIC13.56□□□□□ -0.24
Banf1O54962 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.56□□□□□ -0.24
Banf1O54962 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Banf1O54962 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.56□□□□□ -0.24
Banf1O54962 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.56□□□□□ -0.24
Banf1O54962 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.56□□□□□ -0.24
Banf1O54962 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Banf1O54962 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.55□□□□□ -0.24
Banf1O54962 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Banf1O54962 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Banf1O54962 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.55□□□□□ -0.24
Banf1O54962 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.55□□□□□ -0.24
Banf1O54962 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Banf1O54962 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.55□□□□□ -0.24
Banf1O54962 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Banf1O54962 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.55□□□□□ -0.24
Banf1O54962 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Banf1O54962 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.55□□□□□ -0.24
Banf1O54962 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Banf1O54962 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Banf1O54962 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Banf1O54962 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.54□□□□□ -0.24
Banf1O54962 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Banf1O54962 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Banf1O54962 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.54□□□□□ -0.24
Banf1O54962 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Banf1O54962 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.54□□□□□ -0.24
Banf1O54962 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.54□□□□□ -0.24
Banf1O54962 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.54□□□□□ -0.24
Banf1O54962 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Banf1O54962 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Banf1O54962 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Banf1O54962 Gm9522-201ENSMUST00000182394 926 ntBASIC13.54□□□□□ -0.24
Banf1O54962 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Banf1O54962 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.54□□□□□ -0.24
Banf1O54962 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Banf1O54962 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.54□□□□□ -0.24
Banf1O54962 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Banf1O54962 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Banf1O54962 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.54□□□□□ -0.24
Banf1O54962 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.54□□□□□ -0.24
Banf1O54962 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Banf1O54962 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms