Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldn5O54942 Gm16202-201ENSMUST00000117532 544 ntBASIC13.82□□□□□ -0.2
Cldn5O54942 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.82□□□□□ -0.2
Cldn5O54942 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cldn5O54942 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.82□□□□□ -0.2
Cldn5O54942 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.82□□□□□ -0.2
Cldn5O54942 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldn5O54942 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.82□□□□□ -0.2
Cldn5O54942 Gm37497-201ENSMUST00000195830 798 ntBASIC13.82□□□□□ -0.2
Cldn5O54942 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.82□□□□□ -0.2
Cldn5O54942 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldn5O54942 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.82□□□□□ -0.2
Cldn5O54942 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Gm10146-201ENSMUST00000072739 309 ntBASIC13.82□□□□□ -0.2
Cldn5O54942 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cldn5O54942 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.82□□□□□ -0.2
Cldn5O54942 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldn5O54942 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn5O54942 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.81□□□□□ -0.2
Cldn5O54942 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.81□□□□□ -0.2
Cldn5O54942 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cldn5O54942 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Gm12384-201ENSMUST00000119228 919 ntBASIC13.81□□□□□ -0.2
Cldn5O54942 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.81□□□□□ -0.2
Cldn5O54942 Mir7221-201ENSMUST00000184009 72 ntBASIC13.81□□□□□ -0.2
Cldn5O54942 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.81□□□□□ -0.2
Cldn5O54942 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn5O54942 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.81□□□□□ -0.2
Cldn5O54942 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.81□□□□□ -0.2
Cldn5O54942 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cldn5O54942 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.81□□□□□ -0.2
Cldn5O54942 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Cldn5O54942 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldn5O54942 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldn5O54942 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cldn5O54942 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cldn5O54942 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cldn5O54942 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cldn5O54942 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Gm12742-201ENSMUST00000117326 410 ntBASIC13.8□□□□□ -0.2
Cldn5O54942 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cldn5O54942 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.8□□□□□ -0.2
Cldn5O54942 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Gm27682-201ENSMUST00000183930 110 ntBASIC13.8□□□□□ -0.2
Cldn5O54942 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.8□□□□□ -0.2
Cldn5O54942 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.8□□□□□ -0.2
Cldn5O54942 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cldn5O54942 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Cldn5O54942 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cldn5O54942 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.8□□□□□ -0.2
Cldn5O54942 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldn5O54942 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.8□□□□□ -0.2
Cldn5O54942 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms