Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Limk2O54785 Gm42693-201ENSMUST00000196779 631 ntBASIC13.53□□□□□ -0.24
Limk2O54785 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Limk2O54785 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.53□□□□□ -0.24
Limk2O54785 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.53□□□□□ -0.24
Limk2O54785 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.53□□□□□ -0.24
Limk2O54785 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.53□□□□□ -0.24
Limk2O54785 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Limk2O54785 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limk2O54785 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.52□□□□□ -0.25
Limk2O54785 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.52□□□□□ -0.25
Limk2O54785 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.52□□□□□ -0.25
Limk2O54785 Gm8652-201ENSMUST00000181363 964 ntBASIC13.52□□□□□ -0.25
Limk2O54785 Gm27731-201ENSMUST00000185192 107 ntBASIC13.52□□□□□ -0.25
Limk2O54785 Gm37424-201ENSMUST00000191727 561 ntBASIC13.52□□□□□ -0.25
Limk2O54785 Gm7561-201ENSMUST00000211203 886 ntBASIC13.52□□□□□ -0.25
Limk2O54785 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Limk2O54785 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.52□□□□□ -0.25
Limk2O54785 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Limk2O54785 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.52□□□□□ -0.25
Limk2O54785 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Limk2O54785 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limk2O54785 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Limk2O54785 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.51□□□□□ -0.25
Limk2O54785 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Limk2O54785 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Limk2O54785 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Limk2O54785 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.51□□□□□ -0.25
Limk2O54785 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Limk2O54785 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.51□□□□□ -0.25
Limk2O54785 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.51□□□□□ -0.25
Limk2O54785 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Limk2O54785 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.51□□□□□ -0.25
Limk2O54785 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Limk2O54785 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
Limk2O54785 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limk2O54785 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms