Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cl1O35188 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cl1O35188 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.54□□□□□ -0.4
Cx3cl1O35188 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.54□□□□□ -0.4
Cx3cl1O35188 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Gm2495-201ENSMUST00000191160 466 ntBASIC12.54□□□□□ -0.4
Cx3cl1O35188 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.54□□□□□ -0.4
Cx3cl1O35188 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.54□□□□□ -0.4
Cx3cl1O35188 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.54□□□□□ -0.4
Cx3cl1O35188 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cl1O35188 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.53□□□□□ -0.4
Cx3cl1O35188 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.53□□□□□ -0.4
Cx3cl1O35188 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Gm44397-201ENSMUST00000195950 113 ntBASIC12.53□□□□□ -0.4
Cx3cl1O35188 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.53□□□□□ -0.4
Cx3cl1O35188 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cx3cl1O35188 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cx3cl1O35188 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cx3cl1O35188 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.52□□□□□ -0.4
Cx3cl1O35188 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cx3cl1O35188 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.52□□□□□ -0.4
Cx3cl1O35188 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cx3cl1O35188 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cx3cl1O35188 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cx3cl1O35188 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cx3cl1O35188 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cx3cl1O35188 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cx3cl1O35188 Gm5745-201ENSMUST00000183748 313 ntBASIC12.52□□□□□ -0.41
Cx3cl1O35188 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.52□□□□□ -0.41
Cx3cl1O35188 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms