Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.4□□□□□ -0.58
Casp6O08738 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Casp6O08738 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Casp6O08738 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casp6O08738 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.4□□□□□ -0.58
Casp6O08738 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.4□□□□□ -0.58
Casp6O08738 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casp6O08738 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casp6O08738 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casp6O08738 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casp6O08738 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casp6O08738 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casp6O08738 Mir877-201ENSMUST00000104738 85 ntBASIC11.4□□□□□ -0.58
Casp6O08738 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.4□□□□□ -0.58
Casp6O08738 Gm14350-201ENSMUST00000116642 640 ntBASIC11.4□□□□□ -0.58
Casp6O08738 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.4□□□□□ -0.58
Casp6O08738 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.4□□□□□ -0.58
Casp6O08738 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.4□□□□□ -0.58
Casp6O08738 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.4□□□□□ -0.58
Casp6O08738 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.4□□□□□ -0.58
Casp6O08738 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.4□□□□□ -0.58
Casp6O08738 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.4□□□□□ -0.58
Casp6O08738 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.4□□□□□ -0.58
Casp6O08738 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.4□□□□□ -0.58
Casp6O08738 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casp6O08738 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casp6O08738 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Casp6O08738 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.4□□□□□ -0.58
Casp6O08738 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Casp6O08738 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.4□□□□□ -0.58
Casp6O08738 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casp6O08738 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Casp6O08738 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Casp6O08738 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Casp6O08738 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Casp6O08738 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Casp6O08738 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Casp6O08738 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Casp6O08738 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.39□□□□□ -0.59
Casp6O08738 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Casp6O08738 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.39□□□□□ -0.59
Casp6O08738 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.39□□□□□ -0.59
Casp6O08738 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.39□□□□□ -0.59
Casp6O08738 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.39□□□□□ -0.59
Casp6O08738 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.39□□□□□ -0.59
Casp6O08738 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.39□□□□□ -0.59
Casp6O08738 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.39□□□□□ -0.59
Casp6O08738 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Casp6O08738 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Casp6O08738 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.39□□□□□ -0.59
Casp6O08738 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.39□□□□□ -0.59
Casp6O08738 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.39□□□□□ -0.59
Casp6O08738 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Casp6O08738 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.39□□□□□ -0.59
Casp6O08738 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casp6O08738 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms