Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.35□□□□□ -0.11
Usp35M0QWN7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.35□□□□□ -0.11
Usp35M0QWN7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.35□□□□□ -0.11
Usp35M0QWN7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp35M0QWN7 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.34□□□□□ -0.11
Usp35M0QWN7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Gm11814-201ENSMUST00000119515 929 ntBASIC14.34□□□□□ -0.11
Usp35M0QWN7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.34□□□□□ -0.11
Usp35M0QWN7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp35M0QWN7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Usp35M0QWN7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Usp35M0QWN7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp35M0QWN7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usp35M0QWN7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Usp35M0QWN7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp35M0QWN7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Gm15371-201ENSMUST00000117057 784 ntBASIC14.33□□□□□ -0.12
Usp35M0QWN7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.33□□□□□ -0.12
Usp35M0QWN7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Gm29741-201ENSMUST00000192667 421 ntBASIC14.33□□□□□ -0.12
Usp35M0QWN7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.33□□□□□ -0.12
Usp35M0QWN7 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.33□□□□□ -0.12
Usp35M0QWN7 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.33□□□□□ -0.12
Usp35M0QWN7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.33□□□□□ -0.12
Usp35M0QWN7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Usp35M0QWN7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp35M0QWN7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.32□□□□□ -0.12
Usp35M0QWN7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.32□□□□□ -0.12
Usp35M0QWN7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gm13689-201ENSMUST00000119360 685 ntBASIC14.32□□□□□ -0.12
Usp35M0QWN7 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms