Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3tc1G3X9F6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3tc1G3X9F6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Snord83b-201ENSMUST00000104546 94 ntBASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Gm22121-201ENSMUST00000175148 54 ntBASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Gm26956-201ENSMUST00000182176 986 ntBASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3tc1G3X9F6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sh3tc1G3X9F6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3tc1G3X9F6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3tc1G3X9F6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sh3tc1G3X9F6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3tc1G3X9F6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Sh3tc1G3X9F6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.02■□□□□ 0.15
Sh3tc1G3X9F6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3tc1G3X9F6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm24830-201ENSMUST00000102024 166 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm25890-201ENSMUST00000177643 165 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm22614-201ENSMUST00000178300 165 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm31256-201ENSMUST00000194705 506 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm22042-201ENSMUST00000082989 165 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm26232-201ENSMUST00000083360 166 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm24136-201ENSMUST00000083374 165 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm26110-201ENSMUST00000083971 165 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3tc1G3X9F6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms