Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Morn2-202ENSMUST00000227729 656 ntBASIC15.93■□□□□ 0.14
Ube4aE9Q735 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.93■□□□□ 0.14
Ube4aE9Q735 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ube4aE9Q735 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Ube4aE9Q735 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.92■□□□□ 0.14
Ube4aE9Q735 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.92■□□□□ 0.14
Ube4aE9Q735 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.92■□□□□ 0.14
Ube4aE9Q735 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ube4aE9Q735 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Gm15236-201ENSMUST00000117309 379 ntBASIC15.91■□□□□ 0.14
Ube4aE9Q735 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Gm13316-201ENSMUST00000140537 691 ntBASIC15.91■□□□□ 0.14
Ube4aE9Q735 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ube4aE9Q735 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.9■□□□□ 0.14
Ube4aE9Q735 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.9■□□□□ 0.14
Ube4aE9Q735 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.9■□□□□ 0.14
Ube4aE9Q735 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Gm26083-201ENSMUST00000157904 193 ntBASIC15.9■□□□□ 0.14
Ube4aE9Q735 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.9■□□□□ 0.14
Ube4aE9Q735 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Ube4aE9Q735 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ube4aE9Q735 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Ube4aE9Q735 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms