Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm3543D3Z235 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Gm3543D3Z235 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Gm15371-201ENSMUST00000117057 784 ntBASIC12.08□□□□□ -0.48
Gm3543D3Z235 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.08□□□□□ -0.48
Gm3543D3Z235 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.08□□□□□ -0.48
Gm3543D3Z235 Gm43433-201ENSMUST00000196573 481 ntBASIC12.08□□□□□ -0.48
Gm3543D3Z235 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.08□□□□□ -0.48
Gm3543D3Z235 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.08□□□□□ -0.48
Gm3543D3Z235 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3543D3Z235 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.07□□□□□ -0.48
Gm3543D3Z235 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.07□□□□□ -0.48
Gm3543D3Z235 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.07□□□□□ -0.48
Gm3543D3Z235 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3543D3Z235 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms