Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm8652-201ENSMUST00000181363 964 ntBASIC15.57■□□□□ 0.08
Usp42B2RQC2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.57■□□□□ 0.08
Usp42B2RQC2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.57■□□□□ 0.08
Usp42B2RQC2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.57■□□□□ 0.08
Usp42B2RQC2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp42B2RQC2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Gm8213-201ENSMUST00000118191 441 ntBASIC15.56■□□□□ 0.08
Usp42B2RQC2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.56■□□□□ 0.08
Usp42B2RQC2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.56■□□□□ 0.08
Usp42B2RQC2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.56■□□□□ 0.08
Usp42B2RQC2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp42B2RQC2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm16202-201ENSMUST00000117532 544 ntBASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm11478-201ENSMUST00000117851 599 ntBASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm11814-201ENSMUST00000119515 929 ntBASIC15.55■□□□□ 0.08
Usp42B2RQC2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.55■□□□□ 0.08
Usp42B2RQC2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp42B2RQC2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.54■□□□□ 0.08
Usp42B2RQC2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.54■□□□□ 0.08
Usp42B2RQC2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp42B2RQC2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms