Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Gm15678-201ENSMUST00000117573 960 ntBASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc194A0A140LIT1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Gm17330-201ENSMUST00000221047 165 ntBASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc194A0A140LIT1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms