Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm9385-201ENSMUST00000117563 472 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm15957-201ENSMUST00000118893 974 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm15483-201ENSMUST00000120338 456 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm44719-201ENSMUST00000206404 149 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Psmb5-202ENSMUST00000227257 622 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm6973-201ENSMUST00000117080 721 ntBASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm15427-201ENSMUST00000117288 531 ntBASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rpph1-201ENSMUST00000175096 319 ntBASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms