Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Gm13223-201ENSMUST00000118609 747 ntBASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5-4A0A075B652 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Gm6912-201ENSMUST00000117218 544 ntBASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5-4A0A075B652 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5-4A0A075B652 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms