Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gm10275-202ENSMUST00000168697 495 ntBASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gm2445-201ENSMUST00000182798 989 ntBASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gm45747-201ENSMUST00000212203 999 ntBASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Rps4l-201ENSMUST00000071745 943 ntBASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gm10275-201ENSMUST00000092620 635 ntBASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav8-1A0A075B641 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms