Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Mir874-201ENSMUST00000104769 76 ntBASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Gm12341-201ENSMUST00000119724 503 ntBASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Gm45841-201ENSMUST00000207700 164 ntBASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.51□□□□□ -0.41
Cldn6Q9Z262 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Gm7488-201ENSMUST00000117148 684 ntBASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Gm12859-201ENSMUST00000117834 427 ntBASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cldn6Q9Z262 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm13689-201ENSMUST00000119360 685 ntBASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm38223-201ENSMUST00000194484 695 ntBASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm37917-201ENSMUST00000194711 392 ntBASIC12.49□□□□□ -0.41
Cldn6Q9Z262 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.49□□□□□ -0.41
Cldn6Q9Z262 Gm18307-201ENSMUST00000206864 949 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms