Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Gm8602-201ENSMUST00000184045 607 ntBASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Gm5035-201ENSMUST00000215581 927 ntBASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Gm15429-201ENSMUST00000151268 798 ntBASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Gm8463-201ENSMUST00000208573 613 ntBASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Gm5356-201ENSMUST00000093326 615 ntBASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clcf1Q9QZM3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Clcf1Q9QZM3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms