Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Gm22189-201ENSMUST00000103822 86 ntBASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Gm21854-201ENSMUST00000179901 471 ntBASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Gm42612-201ENSMUST00000197986 623 ntBASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Gm43170-201ENSMUST00000199827 612 ntBASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.05□□□□□ -0.48
Sec61a2Q9JLR1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Grk6-205ENSMUST00000224653 2976 ntBASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Gm7488-201ENSMUST00000117148 684 ntBASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Gm18905-201ENSMUST00000205454 928 ntBASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Gm17795-201ENSMUST00000214505 757 ntBASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a2Q9JLR1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms