Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm21901-201ENSMUST00000189568 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm29424-201ENSMUST00000189716 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm28599-201ENSMUST00000189838 694 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21867-201ENSMUST00000189917 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm29269-201ENSMUST00000190087 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21722-201ENSMUST00000190153 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm28423-201ENSMUST00000190701 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21899-201ENSMUST00000190745 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21910-201ENSMUST00000191163 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21849-201ENSMUST00000191571 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm28678-201ENSMUST00000191593 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm20910-201ENSMUST00000193268 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21871-201ENSMUST00000194621 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm45841-201ENSMUST00000207700 164 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gm9385-201ENSMUST00000117563 472 ntBASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gm1401-201ENSMUST00000122048 772 ntBASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Mir497b-201ENSMUST00000093601 125 ntBASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgn3Q9DCB1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Gm9727-201ENSMUST00000161387 555 ntBASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Gm5364-201ENSMUST00000216789 889 ntBASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgn3Q9DCB1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms