Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gm11425-201ENSMUST00000119608 498 ntBASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.41□□□□□ -0.42
Cdc40Q9DC48 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gm9396-201ENSMUST00000076703 567 ntBASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdc40Q9DC48 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Gm43094-201ENSMUST00000196549 921 ntBASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdc40Q9DC48 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdc40Q9DC48 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdc40Q9DC48 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms