Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rsph9Q9D9V4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm12742-201ENSMUST00000117326 410 ntBASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm14660-201ENSMUST00000119809 575 ntBASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm11803-201ENSMUST00000119966 444 ntBASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm43630-201ENSMUST00000201550 776 ntBASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm26315-201ENSMUST00000083890 321 ntBASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rsph9Q9D9V4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gm8213-201ENSMUST00000118191 441 ntBASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Snora78-201ENSMUST00000158630 128 ntBASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gm27731-201ENSMUST00000185192 107 ntBASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rsph9Q9D9V4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms