Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.54□□□□□ -0.4
Chaf1bQ9D0N7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Gm9824-201ENSMUST00000178707 561 ntBASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Gm18766-201ENSMUST00000189811 808 ntBASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chaf1bQ9D0N7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chaf1bQ9D0N7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Gm5566-201ENSMUST00000116118 459 ntBASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Gm14494-201ENSMUST00000118786 435 ntBASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Gm18889-201ENSMUST00000174284 929 ntBASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chaf1bQ9D0N7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms