Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd1Q9D0E3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Gm11979-201ENSMUST00000119629 743 ntBASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd1Q9D0E3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm12990-201ENSMUST00000120372 468 ntBASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm13937-201ENSMUST00000121000 988 ntBASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm25881-201ENSMUST00000157783 103 ntBASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd1Q9D0E3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm13736-201ENSMUST00000119272 253 ntBASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm14832-201ENSMUST00000121289 322 ntBASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm12783-201ENSMUST00000121425 397 ntBASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm4482-201ENSMUST00000200876 742 ntBASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm17831-201ENSMUST00000205579 900 ntBASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lysmd1Q9D0E3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms